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So I went through the 64x version and conformed the textures to the structure and filenames for hc 1.8.9e, making notes as I went as to what was changed or missing.
Here are the links:
Text file listing changes to structure of and missing files in 1.8.9e
EDIT II: The original link to the 1.8.9 conformed .zip contained a file that wasn't renamed when it should have been, so here's the link to the fixed .zip:
FIXED .zip file with conformed (but incomplete) 1.8.9e 64x texture pack
I'm about to diff the original 64x texture pack (I'm working with the 64x pack because it has more files than the 128x pack) against 1.7.10Lb (which is the last available 1.7.10 version of HC), and hopefully I'll have a file up listing the missing files (and any changes, if applicable) pretty soon (meaning in a couple of hours if all goes well, or 24 hours from now if it doesn't). After that, I hope to list at least the changes/missing for 1.9.4, and perhaps 1.10.2 as well, but I'm not so excited about 1.10.2 that I'm whipping myself to get that done (sorry). But who knows?
EDIT: Well, it was only two hours then

List of missing files for HC 1.7.10Lb, which is the latest 1.7.10 HC version.
Anyway, hope this is somehow helpful to the project-- I really hope that we can get this patch completed before .... the next blue moon (or before Pam adds another 1200 items to HarvestCraft)

EDIT III:
Last but not least, we now have
a list of the missing files for HC1.9.4-1.10.2 and
Less than 150 textures stands between us and this patch being done. Just so you know. There are, on average, 1343 files in the HC textures folder (1415 in 1.7.10Lb, 1294 in 1.8.9e, and 1321 in 1.9.4-1.10.2)
So that means that you heroes (and heroines) have completed more than 1200 textures for this pack. 90% of this patch is DONE! Congratulations!
Looking forward to seeing this patch get off the WIP forum on on the list of releases! Thanks!!